TY - GEN
T1 - Creating synthetic digital slides using conditional generative adversarial networks
T2 - Medical Imaging 2018: Digital Pathology
AU - Senaras, Caglar
AU - Sahiner, Berkman
AU - Tozbikian, Gary
AU - Lozanski, Gerard
AU - Gurcan, Metin N.
N1 - Publisher Copyright:
© COPYRIGHT SPIE. Downloading of the abstract is permitted for personal use only.
PY - 2018
Y1 - 2018
N2 - Immunohistochemical staining (IHC) of tissue sections is routinely used in pathology to diagnose and characterize malignant tumors. Unfortunately, in the majority of cases, IHC stain interpretation is completed by a trained pathologist using a manual method, which consists of counting each positively and negatively stained cell under a microscope. Even in the hands of expert pathologists, the manual enumeration suffers from poor reproducibility. In this study, we propose a novel method to create artificial datasets in silico with known ground truth, allowing us to analyze the accuracy, precision, and intra-And inter-observer variability in a systematic manner and compare different computer analysis approaches. Our approach employs conditional Generative Adversarial Networks. We created our dataset by using 32 different breast cancer patients' Ki67 stained tissues. Our experiments indicated that synthetic images are indistinguishable from real images: The accuracy of five experts (3 pathologists and 2 image analysts) in distinguishing between 15 real and 15 synthetic images was only 47.3% (±8.5%).
AB - Immunohistochemical staining (IHC) of tissue sections is routinely used in pathology to diagnose and characterize malignant tumors. Unfortunately, in the majority of cases, IHC stain interpretation is completed by a trained pathologist using a manual method, which consists of counting each positively and negatively stained cell under a microscope. Even in the hands of expert pathologists, the manual enumeration suffers from poor reproducibility. In this study, we propose a novel method to create artificial datasets in silico with known ground truth, allowing us to analyze the accuracy, precision, and intra-And inter-observer variability in a systematic manner and compare different computer analysis approaches. Our approach employs conditional Generative Adversarial Networks. We created our dataset by using 32 different breast cancer patients' Ki67 stained tissues. Our experiments indicated that synthetic images are indistinguishable from real images: The accuracy of five experts (3 pathologists and 2 image analysts) in distinguishing between 15 real and 15 synthetic images was only 47.3% (±8.5%).
KW - Conditional Generative Adversarial Networks
KW - Immunohistochemical staining
KW - Synthetic Digital Slides
UR - http://www.scopus.com/inward/record.url?scp=85049160982&partnerID=8YFLogxK
U2 - 10.1117/12.2294999
DO - 10.1117/12.2294999
M3 - Conference contribution
AN - SCOPUS:85049160982
T3 - Progress in Biomedical Optics and Imaging - Proceedings of SPIE
BT - Medical Imaging 2018
A2 - Gurcan, Metin N.
A2 - Tomaszewski, John E.
PB - SPIE
Y2 - 11 February 2018 through 12 February 2018
ER -