TY - GEN
T1 - Entropy based quantification of Ki-67 positive cell images and its evaluation by a reader study
AU - Niazi, M. Khalid Khan
AU - Pennell, Michael
AU - Elkins, Camille
AU - Hemminger, Jessica
AU - Jin, Ming
AU - Kirby, Sean
AU - Kurt, Habibe
AU - Miller, Barrie
AU - Plocharczyk, Elizabeth
AU - Roth, Rachel
AU - Ziegler, Rebecca
AU - Shana'ah, Arwa
AU - Racke, Fred
AU - Lozanski, Gerard
AU - Gurcan, Metin N.
PY - 2013
Y1 - 2013
N2 - Presence of Ki-67, a nuclear protein, is typically used to measure cell proliferation. The quantification of the Ki-67 proliferation index is performed visually by the pathologist; however, this is subject to inter- and intra-reader variability. Automated techniques utilizing digital image analysis by computers have emerged. The large variations in specimen preparation, staining, and imaging as well as true biological heterogeneity of tumor tissue often results in variable intensities in Ki-67 stained images. These variations affect the performance of currently developed methods. To optimize the segmentation of Ki-67 stained cells, one should define a data dependent transformation that will account for these color variations instead of defining a fixed linear transformation to separate different hues. To address these issues in images of tissue stained with Ki-67, we propose a methodology that exploits the intrinsic properties of CIE L*a*b*color space to translate this complex problem into an automatic entropy based thresholding problem. The developed method was evaluated through two reader studies with pathology residents and expert hematopathologists. Agreement between the proposed method and the expert pathologists was good (CCC = 0.80).
AB - Presence of Ki-67, a nuclear protein, is typically used to measure cell proliferation. The quantification of the Ki-67 proliferation index is performed visually by the pathologist; however, this is subject to inter- and intra-reader variability. Automated techniques utilizing digital image analysis by computers have emerged. The large variations in specimen preparation, staining, and imaging as well as true biological heterogeneity of tumor tissue often results in variable intensities in Ki-67 stained images. These variations affect the performance of currently developed methods. To optimize the segmentation of Ki-67 stained cells, one should define a data dependent transformation that will account for these color variations instead of defining a fixed linear transformation to separate different hues. To address these issues in images of tissue stained with Ki-67, we propose a methodology that exploits the intrinsic properties of CIE L*a*b*color space to translate this complex problem into an automatic entropy based thresholding problem. The developed method was evaluated through two reader studies with pathology residents and expert hematopathologists. Agreement between the proposed method and the expert pathologists was good (CCC = 0.80).
KW - Entropy
KW - Intrinsic properties.
KW - Linear transformation
KW - Stain variations
UR - http://www.scopus.com/inward/record.url?scp=84878598771&partnerID=8YFLogxK
U2 - 10.1117/12.2007909
DO - 10.1117/12.2007909
M3 - Conference contribution
AN - SCOPUS:84878598771
SN - 9780819494504
T3 - Progress in Biomedical Optics and Imaging - Proceedings of SPIE
BT - Medical Imaging 2013
T2 - SPIE Medical Imaging Symposium 2013: Digital Pathology
Y2 - 10 February 2013 through 11 February 2013
ER -